SeasonRound 1st Leg2nd LegAggregate
1968/69R1Aris Thessaloniki (GRE) vs Hibernians1-06-0(7-0)
1969/70R1Dinamo Bacau (ROM) vs Floriana6-01-0(7-0)
1970/71R1AB Copenhagen (DEN) vs Sliema Wanderers7-03-2(10-2)
1971/72R1Marsa vs Juventus (ITA)0-60-5(0-11)
1972/73R1Inter (ITA) vs Valletta6-11-0(7-1)
1973/74R1Sliema Wanderers vs Lokomotiv Plovdiv (BUL)0-20-1(0-3)
1974/75R1FC Amsterdam (NED) vs Hibernians7-05-0 *(12-0)
1975/76R1Sliema Wanderers vs Sporting Lisboa (POR)1-21-3(2-5)
1976/77R1Grasshoppers (SWI) vs Hibernians7-02-0(9-0)
1977/78R1Eintracht Frankfurt (GER) vs Sliema Wanderers5-00-0(5-0)
1978/79R1Sporting Braga (POR) vs Hibernians5-02-3(7-3)
1979/80R1Valletta vs Leeds United (ENG)0-40-3(0-7)
1980/81R1Sliema Wanderers vs Barcelona (SPA)0-20-1(0-3)
1981/82R1Aris Thessaloniki (GRE) vs Sliema Wanderers4-04-2(8-2)
1982/83R1Zurrieq vs Hajduk Split (YUG)1-40-4(1-8)
1983/84R1Rabat Ajax vs TJ Internacionál Slovnaft Bratislava (CZE)0-100-6(0-16)
1984/85R1Rabat Ajax vs Partizan Beograd (YUG)0-20-2(0-4)
1985/86R1Hamrun Spartans vs Dinamo Tirana (ALB)0-10-0(0-1)
1986/87R1Hibernians vs Trakia Plovdiv (BUL)0-20-8(0-10)
1987/88R1Valletta vs Juventus (ITA)0-40-3(0-7)
1988/89R1Sliema Wanderers vs Victoria Bucharest (ROM)0-21-6(1-8)
1989/90R1Valletta vs First Wien (AUT)1-40-3(1-7)
1990/91R1Hibernians vs Partizan Beograd (YUG)0-30-2(0-5)
1991/92R1Neuchatel Xamax (SWI) vs Floriana2-00-0(2-0)
1992/93R1Floriana vs Borussia Dortmund (GER)0-12-7(2-8)
1993/94R1Trabzonspor (TUR) vs Valletta3-13-1(6-2)
1994/95QDinamo Minsk (BLR) vs Hibernians3-13-4 aet(6-5)
 QValletta vs Rapid Bucharest (ROM)2-61-1(3-7)
1995/96QHibernians vs Chernomorets (UKR)2-50-2(2-7)
 QOmonoia Nicosia (CYP) vs Sliema Wanderers3-02-1(5-1)
1996/97Q1SLIEMA WANDERERS vs Margveti Zestaphoni (GEO)1-33-0(4-3)
 Q2Sliema Wanderers vs Odense (DEN)0-21-7(1-9)
 Q1Beitar Jerusalem (ISR) vs Floriana3-15-1(8-2)
1997/98Q1Birkirkara vs Spartak Trnava (SVK)0-11-3(1-4)
1998/99Q1Shakthar Donetsk (UKR) vs Birkirkara2-14-0(6-1)
1999/2000QLyngby (DEN) vs Birkirkara7-00-0(7-0)
 QSliema Wanderers vs FC Zurich (SWI)0-30-1(0-4)
2000/01Q1NK Rijeka (CRO) vs Valletta FC3-25-4 aet(8-6)
 Q1Sliema Wanderers vs Partizan Beograd (YUG)2-11-4(3-5)
2001/02Q1SK Matador Puchov (SVK) vs Sliema Wanderers3-01-2(4-2)
 Q1BIRKIRKARA vs Lokomotiv Tbilisi (GEO)0-01-1(1-1) **
 R1Dynamo Moscow (RUS) vs Birkirkara1-00-0(1-0)
2002/03Q1Sliema Wanderers vs KS Polonia Warszawa (POL)1-30-21-5
 Q1FC Metalurh Zaporizhya (UKR) vs Birkirkara3-00-03-0
2003/04Q1Valletta vs Neuchatel Xamax (SWI)0-20-2(0-4)
 Q1Birkirkara vs Ferencvaros (HUN)0-50-1(0-6)
2004/05Q1Marsaxlokk vs NK Primorje (SLO)0-10-2(0-3)
 Q1FK Partizani Tirana (ALB) vs Birkirkara4-21-2(5-4)
2005/06Q1Birkirkara vs APOEL FC (CYP)0-20-4(0-6)
 Q1AC Omonia Nicosia (CYP) vs Hibernians3-03-0(6-0)
2006/07Q1Rapid Bucharest (ROM) vs Sliema Wanderers5-01-0(6-0)
 Q1Hibernians vs Dinamo Bucharest (ROM)0-41-5(1-9)
2007/08Q1Sliema Wanderers vs PFC Litex Lovech (BUL)0-30-4(0-7)
 Q1FK Vojvodina (SRB) vs Hibernians5-12-0(7-1)
2008/09Q1HNK Hajduk Split (CRO) vs Birkirkara FC4-03-0(7-0)
 Q1Marsaxlokk FC vs NK Slaven Koprivnica (CRO)0-40-4(0-8)
2009/10Q1NK Slaven Koprivnica (CRO) vs Birkirkara FC1-00-0(1-0)
 Q1VALLETTA FC vs Keflavik (ICE)3-02-2(5-2)
 Q2St. Patrick’s Athletic (IRE) vs Valletta FC1-11-0(2-1)
 Q2Sliema Wanderers vs Maccabi Netanya (ISR)0-00-3(0-3)
2010/11Q1HNK Sibenik (CRO) vs Sliema Wanderers0-03-0(3-0)
 Q2Valletta vs Ruch Chorzow (POL)1-10-0(1-1) ***
2011/12Q1Birkirkara vs FK Vllaznia Shkoder0-11-1(1-2)
 Q2Floriana vs AEK Larnaca (CYP)0-80-1(0-9)
2012/13Q1Birkirkara vs Metalurg Skopje (MKD)2-20-0(2-2) ****
 Q1IF Elfsborg (SWE) vs Floriana8-04-0(12-0)
 Q1FK Sarajevo (BOS) vs Hibernians5-24-4(9-6)
2013/14Q1Sliema Wanderers vs FC Khazar Lankaran (AZE)1-10-1(1-2)
 Q1Hibernians vs FK Vojvodina (SRB)1-42-3(3-7)
 Q1SP La Fiorita (SMR) vs VALLETTA0-30-1(0-4)
 Q2Valletta vs FC Minsk (BLR)1-10-2(1-3)
2014/15Q1Diósgyőri VTK (HUN) vs Birkirkara2-14-1(6-2)
 Q1Hibernians vs FC Spartak Trnava (SVK)2-40-5(2-9)
 Q1Sliema Wanderers vs Ferencvárosi TC (HUN)1-11-2(2-3)
2015/16Q1Newtown AFC (WAL) vs Valletta2-12-1(4-2)
 QRBalzan vs FK Željezničar (BIH)0-20-1(0-3)
 Q1BIRKIRKARA vs Ulisses FC (ARM)0-03-1(3-1)
 Q2West Ham United (ENG) vs Birkirkara1-00-1 aet(1-1) (5-3 pen)
2016/17Q1NK Široki Brijeg (BOS) vs BIRKIRKARA1-10-2(1-3)
 Q2BIRKIRKARA vs Heart of Midlothian (SCO)0-02-1(2-1)
 Q3Birkirkara vs FC Krasnodar (RUS)0-31-3(1-6)
 Q1Balzan vs PFK Neftçi (AZE)0-22-1(2-3)
 Q1Spartak Trnava vs Hibernians3-03-0(6-0)
2017/18Q1VALLETTA vs SS Folgore Falciano2-01-0(3-0)
 Q2Valletta vs FC Utrecht (NED)0-01-3(1-3)
 Q1Videoton Fehérvár (HUN) vs Balzan2-03-3(5-3)
 Q1Crvena zvezda (SRB) vs Floriana3-03-3(6-3)
2018/19PRBirkirkara vs KI Klaksvik (FAR)1-11-2(2-3)
 PRSant Julià (AND) vs GZIRA UNITED0-21-2(1-4)
 Q1Radnicki Nis (SRB) vs Gzira United4-01-0(5-0)
 Q1BALZAN vs Kesla FK (AZE)4-11-2(5-3)
 Q2Balzan vs Slovan Bratislava (SVK)2-11-3(3-4)
 Q2HSK Zrinjski Mostar (BOS) vs Valletta1-11-2(2-3)
2019/20Q1GZIRA UNITED vs HNK Hajduk Split (CRO)0-23-1(3-3) *****
Q2FK Ventspils (LTV) vs Gzira United4-02-26-2
Q1Balzan vs NK Domžale (SLO)3-40-1(3-5)
Q1FC Shakhtyor Soligorsk (BLR) vs Hibernians1-01-0(2-0)
Q3FC Astana (KAZ) vs Valletta5-14-0(9-1)

* both matches were played in the Netherlands
** Birkirkara qualify on the away-goals rule
*** Ruch Chorzow qualify on the away-goals rule
**** Metalurg Skopje qualify on the away-goals rule
***** Gzira United qualify on the away-goals rule

Notes:-

  • Names of local clubs in uppercase indicate that the club moved to the next round.
  • In seasons 1994-95, 1995-96 and 1996-97, two Maltese clubs participated because clubs coming from small nations were excluded from the Champions Cup.
  • As from 1999-2000, two clubs participate in the UEFA Cup, since the Cup Winners Cup will no longer be played.
  • As from season 2018/19, teams eliminated from the UEFA Champions League, enter the UEFA Europa League.